Libraries

CMAKE

  1. The C++ compiler does not support C++11 during bootstrap for cmake
  2. Installing cmake 2.8 on CentOS 5
  3. Reverting back to CMake-3.9.6

FLAGS and Path

  1. Using multiple LDFLAGS and CPPFLAGS
  2. Checking libraries location with ldconfig

GNU Compilers

  1. Compiling GNU 4.8.1 on CentOS 6
  2. Compiling GCC 4.7.2 on CentOS 5
  3. Compiling GNU Scientific Library (GSL) gsl-1.16 on CentOS 6
  4. Using Eclipse IDE with Intel C++ Compilers on CentOS
  5. Install GCC 4.8.1 and other Scientitic Packages via Yum on CentOS
  6. Compiling GNU 5.2.0 on CentOS 6
  7. Dealing with The compiler /usr/bin/c++ has no C++11 support for CentOS 6
  8. Compiling glibc-2.14 on CentOS 6

GNU Parallel

  1. Compiling GNU Parallel on CentOS-7

Hadoop

  1. Hadoop and Traditional RDMS
  2. Hadoop and MPI
  3. What is Hadoop?

Intel

  1. Compiling Intel FFTW3 and FFTW2 Interface Wrapper Library
  2. Intel® Math Kernel Library Link Line Advisor
  3. Compiling Intel BLAS95 and LAPACK95 Interface Wrapper Library
  4. Compile and Build FFTW3 wrapper routines on MKL implementation of FFTW

Libraries

  1. Compiling GotoBLAS2 in Nehalem and newer CPU
  2. Compiling ATLAS on CentOS 5
  3. Compiling LAPACK on CentOS 5
  4. Compiling BLACS on CentOS 5
  5. Building BLAS Library using Intel and GNU Compiler
  6. Building LAPACK 3.4 with Intel and GNU Compiler
  7. Building SCALAPACK 2.0.1 with Intel Compiler
  8. Compiling and Installing Boost 1.53
  9. Compiling SamTools
  10. Compiling Eigen
  11. Compiling and installing FFTW 3.3.3
  12. Compiling and installing FFTW 3.3.3 with OpenMPI and OpenMP
  13. Debugging Tools to track run-time errors for mpirun
  14. Compiling igraph-0.7.1 on CentOS 5
  15. Compiling isl-0.15 library

Programming

  1. Use GNU C++ and Intel Compilers with OpenMP
  2. Accurately Time Your Parallel Loops in OpenMP