HDF5 Download can be found here at https://www.hdfgroup.org/downloads/hdf5/. You will need to register an account before you can download
Prerequisites
- GNU GCC-6.5
- OpenMPI-3.1.4
Compiling
% tar -zxvf hdf5-1.12.0.tar.gz
% cd hdf5-1.12.0
% CC=mpicc ./configure --prefix=/usr/local/hdf5-1.12.0-gcc6 --enable-parallel --enable-hl --with-zlib=/usr/local/zlib-1.2.11-gcc6
Features: --------- Parallel HDF5: yes Parallel Filtered Dataset Writes: yes Large Parallel I/O: yes High-level library: yes Build HDF5 Tests: yes Build HDF5 Tools: yes Threadsafety: no Default API mapping: v112 With deprecated public symbols: yes I/O filters (external): deflate(zlib) MPE: Map (H5M) API: no Direct VFD: no (Read-Only) S3 VFD: no (Read-Only) HDFS VFD: no dmalloc: no Packages w/ extra debug output: AC,B2,CX,D,F,HL,I,O,S,ST,T,Z API tracing: yes Using memory checker: no Memory allocation sanity checks: yes Function stack tracing: no Strict file format checks: yes Optimization instrumentation: yes
% make check
% make install