What is STAR 2.7?
Spliced Transcripts Alignment to a Reference
https://www.ncbi.nlm.nih.gov/pubmed/23104886
Hardware/Software Requirements
x86-64 compatible processors
Manual
https://github.com/alexdobin/STAR/blob/master/doc/STARmanual.pdf
Compiling for Source
# Source Intel Compilers
source /usr/local/intel/2018u3/bin/compilervars.sh intel64 source /usr/local/intel/2018u3/impi/2018.3.222/bin64/mpivars.sh intel64 source /usr/local/intel/2018u3/mkl/bin/mklvars.sh intel64 source /usr/local/intel/2018u3/parallel_studio_xe_2018/bin/psxevars.sh intel64 MKLROOT=/usr/local/intel/2018u3/mkl
# wget https://github.com/alexdobin/STAR/archive/2.7.1a.tar.gz # tar -xvzf 2.7.1a.tar.gz # cd STAR-2.7.1a/source # mkdir /usr/local/STAR-2.7.1a # cp STAR /usr/local/STAR-2.7.1a/ # cp STARlong /usr/local/STAR-2.7.1a/ # cp -r htslib /usr/local/STAR-2.7.1a/