Step 1: Preparing the prerequisites
$ vim .bashrc
source /usr/local/intel_2015/bin/compilervars.sh intel64 source /usr/local/intel_2015/impi/5.0.3.049/bin64/mpivars.sh intel64 source /usr/local/intel_2015/mkl/bin/mklvars.sh intel64 export CC=icc export CXX=icpc export F77=ifort export MPICC=mpicc export MPICXX=mpiicpc export CFLAGS="-O3 -xHost -fno-alias -align" export FFLAGS="-O3 -xHost -fno-alias -align" export CXXFLAGS="-O3 -xHost -fno-alias -align" export FFlags="-I/usr/local/intel_2015/impi/5.0.3.049/include64 -L/usr/local/intel_2015/impi/5.0.3.049/lib64"
Step 2: Compile zlib-1
See Compile zlib-1.2.8 with Intel-15.0.6
Step 3: Configure the HDF5
$ tar -zxvf hdf5-1.8.17.tar.gz $ cd hdf5-1.8.17 $ ./configure --prefix=/usr/local/hdf5-1.8.17 --enable-fortran --enable-cxx $ make $ make check $ make install
References
The Linux Cluster 
SZLIB:
export CC=icc
export CXX=icpc
export F77=ifort
export CFLAGS=’-O3 -xHost -ip’
export CXXFLAGS=’-O3 -xHost -ip’
export FFLAGS=’-O3 -xHost -ip’
tar -zxvf szip-2.1.tar.gz
cd szip-2.1
./configure –prefix=/home/user/Mohid/szip-2.1
make
make check
make install
ZLIB:
export CC=icc
export CFLAGS=’-O3 -xHost -ip’
tar -zxvf zlib-1.2.8.tar.gz
cd zlib-1.2.8
./configure –prefix=/home/user/Mohid/zlib-1.2.8
make
make check
make install
hdf5:
export CC=icc
export FC=’ifort -fpp -DDEC$=DEC_ -DMS$=MS_’
export CXX=icpc
tar -zxvf hdf5-1.8.11.tar.gz
cd hdf5-1.8.11
./configure –prefix=/home/user/Mohid/hdf5-1.8.11 –enable-fortran –enable-fortran2003 –enable-cxx –enable-unsupported \
–with-szlib=/home/user/Mohid/szip-2.1 –with-zlib=/home/user/Mohid/zlib-1.2.8/include,/home/user/Mohid/zlib-1.2.8/lib –enable-production
make
make check
make install
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